Index

_

_clinics_list (pyoculus.solvers.manifold.ClinicSet attribute) _fundamental_segments (pyoculus.solvers.manifold.Clinic attribute) _integrator (pyoculus.maps.integrated_map.IntegratedMap attribute) _params (pyoculus.integrators.base_integrator.BaseIntegrator attribute)

_path_s (pyoculus.solvers.manifold.Clinic attribute) _path_u (pyoculus.solvers.manifold.Clinic attribute) _trajectory (pyoculus.solvers.manifold.Clinic attribute) _xend_s (pyoculus.solvers.manifold.Clinic attribute) _xend_u (pyoculus.solvers.manifold.Clinic attribute)

A

A() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricGridPerturbation method) (pyoculus.fields.magnetic_field.MagneticField method) (pyoculus.fields.simsopt_bfield.SimsoptBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.spectre_bfield.SpectreBfield method) (pyoculus.fields.two_waves.TwoWaves method) A_circularcurrentloop() (in module pyoculus.toybox.cylindrical_toybox), [1] A_gaussian() (in module pyoculus.toybox.cylindrical_toybox), [1] A_many() (pyoculus.fields.magnetic_field.MagneticField method) A_maxwellboltzmann() (in module pyoculus.toybox.cylindrical_toybox), [1] A_R() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method)

A_r_squared() (in module pyoculus.toybox.cylindrical_toybox), [1] A_squared() (in module pyoculus.toybox.cylindrical_toybox), [1] A_unperturbed() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method) add_perturbation() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method), [1] add_surface() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) amplitude (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield attribute) amplitudes (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield property) AnalyticCylindricalBfield (class in pyoculus.fields.cylindrical_bfield_analytic) area() (pyoculus.solvers.resonance_zone.ResonanceZone method) args (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator attribute) axis (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection property) AxisymmetricCylindricalGridField (class in pyoculus.fields.cylindrical_grid_interpolated_field) AxisymmetricGridPerturbation (class in pyoculus.fields.cylindrical_grid_interpolated_field)

B

B() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricGridPerturbation method) (pyoculus.fields.m3dc1_bfield.M3DC1Bfield method) (pyoculus.fields.magnetic_field.MagneticField method) (pyoculus.fields.qfm_bfield.QFMBfield method) (pyoculus.fields.simsopt_bfield.SimsoptBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.spectre_bfield.SpectreBfield method) (pyoculus.fields.two_waves.TwoWaves method) B_axi() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method)

B_equilibrium() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) B_interpolated() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method) B_many() (pyoculus.fields.magnetic_field.MagneticField method) (pyoculus.fields.qfm_bfield.QFMBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.two_waves.TwoWaves method) B_perturbation() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) B_R() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricGridPerturbation method) BaseIntegrator (class in pyoculus.integrators.base_integrator) BaseMap (class in pyoculus.maps.base_map) BaseSolver (class in pyoculus.solvers.base_solver) BaseSolver.OutputData (class in pyoculus.solvers.base_solver)

C

Cache (class in pyoculus.maps.cylindrical_bfield_section) cache (pyoculus.maps.cylindrical_bfield_section.Cache attribute) choose() (pyoculus.solvers.manifold.Manifold method), [1] clean_bigsteps() (in module pyoculus.utils.plot), [1] clear() (pyoculus.maps.cylindrical_bfield_section.Cache method) Clinic (class in pyoculus.solvers.manifold) clinics (pyoculus.solvers.manifold.Manifold attribute) ClinicSet (class in pyoculus.solvers.manifold) compute() (pyoculus.solvers.lyapunov_exponent.LyapunovExponent method) (pyoculus.solvers.manifold.Manifold method), [1] (pyoculus.solvers.poincare_plot.PoincarePlot method)

compute_convergence_domain() (in module pyoculus.utils.convergence_domain), [1] compute_iota() (pyoculus.solvers.poincare_plot.PoincarePlot method) compute_manifold() (pyoculus.solvers.manifold.Manifold method), [1] compute_turnstile_areas() (pyoculus.solvers.manifold.Manifold method) construct_interpolant() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) contra_vector_transform() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) convert_coords() (pyoculus.fields.qfm_bfield.QFMBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.two_waves.TwoWaves method) create_canvas() (in module pyoculus.utils.plot), [1] CylindricalBfield (class in pyoculus.fields.cylindrical_bfield) CylindricalBfieldSection (class in pyoculus.maps.cylindrical_bfield_section)

D

dBdX() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField method) (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricGridPerturbation method) (pyoculus.fields.magnetic_field.MagneticField method) (pyoculus.fields.qfm_bfield.QFMBfield method) (pyoculus.fields.simsopt_bfield.SimsoptBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.spectre_bfield.SpectreBfield method) (pyoculus.fields.two_waves.TwoWaves method) dBdX_equilibrium() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) dBdX_many() (pyoculus.fields.magnetic_field.MagneticField method) (pyoculus.fields.qfm_bfield.QFMBfield method) (pyoculus.fields.spec_bfield.SpecBfield method) (pyoculus.fields.two_waves.TwoWaves method)

dBdX_perturbation() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) df() (pyoculus.maps.base_map.BaseMap method) (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) (pyoculus.maps.standard_map.StandardMap method) (pyoculus.maps.tokamap.TokaMap method) (pyoculus.maps.toroidal_bfield_section.ToroidalBfieldSection method) dimension (pyoculus.maps.base_map.BaseMap attribute) dinvJ_matrix() (in module pyoculus.utils.cyl_cart_transform), [1] divB() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) domain (pyoculus.maps.base_map.BaseMap attribute) dwinding() (pyoculus.maps.base_map.BaseMap method) (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) (pyoculus.maps.toroidal_bfield_section.ToroidalBfieldSection method)

E

eig() (in module pyoculus.solvers.manifold), [1] eigenvalues (pyoculus.solvers.fixed_point.FixedPoint property) ellpe() (in module pyoculus.toybox.cylindrical_toybox), [1] ellpk() (in module pyoculus.toybox.cylindrical_toybox), [1]

eps_s (pyoculus.solvers.manifold.Clinic attribute) eps_u (pyoculus.solvers.manifold.Clinic attribute) error_linear_regime() (pyoculus.solvers.manifold.Manifold method), [1] expandcf() (in module pyoculus.utils.continued_fraction), [1]

F

f() (pyoculus.maps.base_map.BaseMap method) (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) (pyoculus.maps.standard_map.StandardMap method) (pyoculus.maps.tokamap.TokaMap method) (pyoculus.maps.toroidal_bfield_section.ToroidalBfieldSection method) f_many() (pyoculus.maps.base_map.BaseMap method) find() (pyoculus.solvers.fixed_point.FixedPoint method) find_axis() (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) find_clinic() (pyoculus.solvers.manifold.Manifold method) find_clinic_single() (pyoculus.solvers.manifold.Manifold method), [1] find_clinics() (pyoculus.solvers.manifold.Manifold method) find_epsilon() (pyoculus.solvers.manifold.Manifold method), [1] find_N() (pyoculus.solvers.manifold.Manifold method), [1] find_other_clinic() (pyoculus.solvers.manifold.Manifold method) find_other_clinic_test() (pyoculus.solvers.manifold.Manifold method)

find_with_iota() (pyoculus.solvers.fixed_point.FixedPoint method) first_epsilons (pyoculus.solvers.manifold.ClinicSet property) (pyoculus.solvers.manifold.Manifold property) FixedPoint (class in pyoculus.solvers.fixed_point) fixedpoint_1 (pyoculus.solvers.manifold.Manifold attribute) fixedpoint_2 (pyoculus.solvers.manifold.Manifold attribute) flux_approx_SL() (pyoculus.solvers.resonance_zone.ResonanceZone method) FluxSurfaceGR (class in pyoculus.solvers.flux_surface_gr) from_guess() (pyoculus.solvers.manifold.Clinic class method) from_h5_file() (pyoculus.fields.spec_bfield.SpecBfield class method) (pyoculus.fields.spectre_bfield.SpectreBfield class method) from_matlab_file() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField class method) from_matlab_file_with_added_B() (pyoculus.fields.cylindrical_grid_interpolated_field.AxisymmetricCylindricalGridField class method) fromcf() (in module pyoculus.utils.continued_fraction), [1] fundamental_segments (pyoculus.solvers.manifold.Clinic property) (pyoculus.solvers.manifold.ClinicSet attribute)

G

get_coords() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) get_lobe_boundary() (pyoculus.solvers.manifold.Manifold method)

get_solution() (pyoculus.integrators.base_integrator.BaseIntegrator method) GreeneMethod() (pyoculus.solvers.flux_surface_gr.FluxSurfaceGR method)

H

hits_polar (pyoculus.solvers.poincare_plot.PoincarePlot property)

hits_rz (pyoculus.solvers.poincare_plot.PoincarePlot property)

I

in_domain() (pyoculus.maps.base_map.BaseMap method) integrate() (pyoculus.integrators.base_integrator.BaseIntegrator method) (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator method) (pyoculus.solvers.manifold.Manifold method) IntegratedMap (class in pyoculus.maps.integrated_map) into_domain() (pyoculus.maps.base_map.BaseMap method)

iota (pyoculus.solvers.poincare_plot.PoincarePlot property) irfft1D() (in module pyoculus.solvers.qfm), [1] irfft2D() (in module pyoculus.solvers.qfm), [1] is_discrete (pyoculus.maps.base_map.BaseMap attribute) is_empty (pyoculus.solvers.manifold.ClinicSet property) is_empty() (pyoculus.solvers.manifold.ClinicSet method)

J

jacobi_transform() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method)

K

k (pyoculus.fields.two_waves.TwoWaves attribute) (pyoculus.fields.two_waves.TwoWaves property)

L

lagrangian() (pyoculus.maps.base_map.BaseMap method) (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) (pyoculus.maps.toroidal_bfield_section.ToroidalBfieldSection method) lambda_s (pyoculus.solvers.manifold.Manifold attribute)

lambda_u (pyoculus.solvers.manifold.Manifold attribute) load() (pyoculus.solvers.manifold.Manifold class method) (pyoculus.solvers.poincare_plot.PoincarePlot method) load_mf_quasr() (pyoculus.solvers.manifold.Manifold method) LyapunovExponent (class in pyoculus.solvers.lyapunov_exponent)

M

M3DC1Bfield (class in pyoculus.fields.m3dc1_bfield) MagneticField (class in pyoculus.fields.magnetic_field) Manifold (class in pyoculus.solvers.manifold) mat_cart2cyl() (in module pyoculus.utils.cyl_cart_transform), [1] mat_cyl2cart() (in module pyoculus.utils.cyl_cart_transform), [1] metric_transform() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) mf (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection attribute) module pyoculus pyoculus.fields pyoculus.fields.cylindrical_bfield pyoculus.fields.cylindrical_bfield_analytic pyoculus.fields.cylindrical_grid_interpolated_field pyoculus.fields.m3dc1_bfield pyoculus.fields.magnetic_field pyoculus.fields.qfm_bfield pyoculus.fields.simsopt_bfield pyoculus.fields.spec_bfield pyoculus.fields.spectre_bfield pyoculus.fields.toroidal_bfield pyoculus.fields.two_waves pyoculus.geo pyoculus.geo.interpolate_coordinates pyoculus.integrators pyoculus.integrators.base_integrator pyoculus.integrators.scipyode_integrator pyoculus.integrators.sdc_integrator pyoculus.maps pyoculus.maps.base_map pyoculus.maps.cylindrical_bfield_section pyoculus.maps.integrated_map pyoculus.maps.standard_map pyoculus.maps.tokamap pyoculus.maps.toroidal_bfield_section pyoculus.solvers pyoculus.solvers.base_solver pyoculus.solvers.fixed_point pyoculus.solvers.flux_surface_gr pyoculus.solvers.lyapunov_exponent pyoculus.solvers.manifold pyoculus.solvers.poincare_plot pyoculus.solvers.qfm pyoculus.solvers.resonance_zone pyoculus.toybox pyoculus.toybox.cylindrical_toybox pyoculus.utils pyoculus.utils.continued_fraction pyoculus.utils.convergence_domain pyoculus.utils.cyl_cart_transform pyoculus.utils.fortran pyoculus.utils.plot

N

nint_pair (pyoculus.solvers.manifold.ClinicSet attribute) nint_s (pyoculus.solvers.manifold.Clinic attribute) nint_u (pyoculus.solvers.manifold.Clinic attribute)

njit() (in module pyoculus.maps.cylindrical_bfield_section) (in module pyoculus.utils.cyl_cart_transform) nsteps (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator attribute)

O

ode (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator attribute)

order() (pyoculus.solvers.manifold.ClinicSet method)

P

perturbations (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield attribute) (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield property) perturbations_args (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield attribute) phi0 (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection attribute) plot() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) (pyoculus.solvers.fixed_point.FixedPoint method) (pyoculus.solvers.manifold.Manifold method), [1] (pyoculus.solvers.poincare_plot.PoincarePlot method) plot_clinics() (pyoculus.solvers.manifold.Manifold method) plot_convergence_domain() (in module pyoculus.utils.convergence_domain), [1] plot_filled_lobe() (pyoculus.solvers.manifold.Manifold method) plot_iota() (pyoculus.solvers.poincare_plot.PoincarePlot method) plot_lobe_boundary() (pyoculus.solvers.manifold.Manifold method) plot_manifold_copies() (pyoculus.solvers.manifold.Manifold method) plot_manifolds() (pyoculus.solvers.resonance_zone.ResonanceZone method) plot_perturbation_levels() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) plot_perturbation_vector() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method) plot_q() (pyoculus.solvers.poincare_plot.PoincarePlot method) plot_reso_zone() (pyoculus.solvers.resonance_zone.ResonanceZone method) PoincarePlot (class in pyoculus.solvers.poincare_plot) points_type (pyoculus.solvers.poincare_plot.PoincarePlot attribute) polarcoords (pyoculus.solvers.fixed_point.FixedPoint property) psi_circularcurrentloop() (in module pyoculus.toybox.cylindrical_toybox), [1] psi_gaussian() (in module pyoculus.toybox.cylindrical_toybox), [1] psi_maxwellboltzmann() (in module pyoculus.toybox.cylindrical_toybox), [1] psi_squared() (in module pyoculus.toybox.cylindrical_toybox), [1] psitob() (in module pyoculus.toybox.cylindrical_toybox), [1] pyoculus module pyoculus.fields module pyoculus.fields.cylindrical_bfield module pyoculus.fields.cylindrical_bfield_analytic module pyoculus.fields.cylindrical_grid_interpolated_field module pyoculus.fields.m3dc1_bfield module pyoculus.fields.magnetic_field module pyoculus.fields.qfm_bfield module pyoculus.fields.simsopt_bfield module pyoculus.fields.spec_bfield module pyoculus.fields.spectre_bfield module pyoculus.fields.toroidal_bfield module pyoculus.fields.two_waves module pyoculus.geo module pyoculus.geo.interpolate_coordinates module

pyoculus.integrators module pyoculus.integrators.base_integrator module pyoculus.integrators.scipyode_integrator module pyoculus.integrators.sdc_integrator module pyoculus.maps module pyoculus.maps.base_map module pyoculus.maps.cylindrical_bfield_section module pyoculus.maps.integrated_map module pyoculus.maps.standard_map module pyoculus.maps.tokamap module pyoculus.maps.toroidal_bfield_section module pyoculus.solvers module pyoculus.solvers.base_solver module pyoculus.solvers.fixed_point module pyoculus.solvers.flux_surface_gr module pyoculus.solvers.lyapunov_exponent module pyoculus.solvers.manifold module pyoculus.solvers.poincare_plot module pyoculus.solvers.qfm module pyoculus.solvers.resonance_zone module pyoculus.toybox module pyoculus.toybox.cylindrical_toybox module pyoculus.utils module pyoculus.utils.continued_fraction module pyoculus.utils.convergence_domain module pyoculus.utils.cyl_cart_transform module pyoculus.utils.fortran module pyoculus.utils.plot module

Q

q (pyoculus.solvers.poincare_plot.PoincarePlot property)

QFMBfield (class in pyoculus.fields.qfm_bfield)

R

R0 (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection attribute) random_initial_guess() (pyoculus.solvers.fixed_point.FixedPoint method) read_surfaces_from_file() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) record_clinic() (pyoculus.solvers.manifold.ClinicSet method), [1] record_data() (pyoculus.solvers.fixed_point.FixedPoint method) remove_perturbation() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method), [1] remove_surface() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) replace_surface() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method) reset() (pyoculus.solvers.manifold.ClinicSet method), [1] ResonanceZone (class in pyoculus.solvers.resonance_zone) retrieve() (pyoculus.maps.cylindrical_bfield_section.Cache method) return_f_t_pure() (in module pyoculus.maps.standard_map), [1] (in module pyoculus.maps.tokamap), [1]

rfft1D() (in module pyoculus.solvers.qfm), [1] rfft2D() (in module pyoculus.solvers.qfm), [1] rfp_s (pyoculus.solvers.manifold.Manifold attribute) rfp_u (pyoculus.solvers.manifold.Manifold attribute) rho (pyoculus.solvers.poincare_plot.PoincarePlot property) rot() (in module pyoculus.toybox.cylindrical_toybox), [1] rotational_transform (pyoculus.solvers.fixed_point.FixedPoint property) rphiz() (in module pyoculus.utils.cyl_cart_transform), [1] rphiz_inv_jac() (in module pyoculus.utils.cyl_cart_transform), [1] rphiz_jac() (in module pyoculus.utils.cyl_cart_transform), [1] rtol (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator attribute) RZcoords (pyoculus.solvers.fixed_point.FixedPoint property)

S

save() (pyoculus.maps.cylindrical_bfield_section.Cache method) (pyoculus.solvers.manifold.Manifold method) (pyoculus.solvers.poincare_plot.PoincarePlot method) save_mf_quasr() (pyoculus.solvers.manifold.Manifold method) ScipyODEIntegrator (class in pyoculus.integrators.scipyode_integrator) set_amplitude() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method), [1] set_initial_value() (pyoculus.integrators.base_integrator.BaseIntegrator method) (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator method) set_perturbation() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield method), [1] set_rhs() (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator method) setup_fortran_module() (in module pyoculus.utils.fortran), [1] sf (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield attribute) shear (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield attribute) show_current_directions() (pyoculus.solvers.manifold.Manifold method), [1] show_directions() (pyoculus.solvers.manifold.Manifold class method) (pyoculus.solvers.manifold.Manifold method)

SimsoptBfield (class in pyoculus.fields.simsopt_bfield) size (pyoculus.maps.cylindrical_bfield_section.Cache attribute) (pyoculus.solvers.manifold.ClinicSet property) SpecBfield (class in pyoculus.fields.spec_bfield) SpectreBfield (class in pyoculus.fields.spectre_bfield) stable (pyoculus.solvers.manifold.Manifold attribute) stable_epsilons (pyoculus.solvers.manifold.ClinicSet property) stable_segment (pyoculus.solvers.manifold.ClinicSet attribute) (pyoculus.solvers.manifold.ClinicSet property) stable_shifts (pyoculus.solvers.manifold.ClinicSet property) StandardMap (class in pyoculus.maps.standard_map) standardmap_f_pure() (in module pyoculus.maps.standard_map), [1] standardmap_frev_pure() (in module pyoculus.maps.standard_map), [1] start_config() (pyoculus.solvers.manifold.Manifold method), [1] successful (pyoculus.solvers.base_solver.BaseSolver property) SurfacesToroidal (class in pyoculus.geo.interpolate_coordinates)

T

t (pyoculus.integrators.base_integrator.BaseIntegrator attribute) to_rhotheta() (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) to_RZ() (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) TokaMap (class in pyoculus.maps.tokamap) tokamap_f_pure() (in module pyoculus.maps.tokamap), [1] tokamap_frev_pure() (in module pyoculus.maps.tokamap), [1] topological_index (pyoculus.solvers.fixed_point.FixedPoint property)

ToroidalBfield (class in pyoculus.fields.toroidal_bfield) ToroidalBfieldSection (class in pyoculus.maps.toroidal_bfield_section) total_number_of_points (pyoculus.solvers.manifold.ClinicSet attribute) (pyoculus.solvers.manifold.ClinicSet property) trajectory (pyoculus.solvers.manifold.Clinic property) turnstile_areas (pyoculus.solvers.manifold.Manifold attribute) TwoWaves (class in pyoculus.fields.two_waves) type (pyoculus.integrators.scipyode_integrator.ScipyODEIntegrator attribute)

U

unstable (pyoculus.solvers.manifold.Manifold attribute) unstable_epsilons (pyoculus.solvers.manifold.ClinicSet property)

unstable_segment (pyoculus.solvers.manifold.ClinicSet attribute) (pyoculus.solvers.manifold.ClinicSet property) unstable_shifts (pyoculus.solvers.manifold.ClinicSet property)

V

vec_cart2cyl() (in module pyoculus.utils.cyl_cart_transform), [1] vec_cyl2cart() (in module pyoculus.utils.cyl_cart_transform), [1]

vector_s (pyoculus.solvers.manifold.Manifold attribute) vector_u (pyoculus.solvers.manifold.Manifold attribute)

W

winding() (pyoculus.maps.base_map.BaseMap method) (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection method) (pyoculus.maps.toroidal_bfield_section.ToroidalBfieldSection method) with_deflation() (pyoculus.solvers.manifold.Clinic class method)

with_horizontal() (pyoculus.solvers.poincare_plot.PoincarePlot class method) with_linspace() (pyoculus.solvers.poincare_plot.PoincarePlot class method) with_new_axis() (pyoculus.fields.cylindrical_bfield_analytic.AnalyticCylindricalBfield class method) with_segments() (pyoculus.solvers.poincare_plot.PoincarePlot class method) write_surfaces_to_file() (pyoculus.geo.interpolate_coordinates.SurfacesToroidal method)

X

x (pyoculus.integrators.base_integrator.BaseIntegrator attribute) x_end_s (pyoculus.solvers.manifold.Clinic property) x_end_u (pyoculus.solvers.manifold.Clinic property)

xs (pyoculus.solvers.poincare_plot.PoincarePlot attribute) xyz() (in module pyoculus.utils.cyl_cart_transform), [1] xyz_inv_jac() (in module pyoculus.utils.cyl_cart_transform), [1] xyz_jac() (in module pyoculus.utils.cyl_cart_transform), [1]

Z

Z0 (pyoculus.maps.cylindrical_bfield_section.CylindricalBfieldSection attribute)